Haase, A., M. Stern, L. Wächtler, and G. Bicker. 2001. A tissue-specific marker of Ecdysozoa. Dev. Genes Evol. 211: 428–433.

Habura, A., D. R. Rosen, and S. S. Bowser. 2004. Predicted secondary structure of the foraminiferal SSU 3′ major domain reveals a molecular synapomorphy for granuloreticulosean protists. Journal of Eukaryotic Microbiology. 51:464-471. [L]

Hackett, J. D., D. M. Anderson, D. L. Erdner, and D. Bhattacharya. 2004. Dinoflagellates: a remarkable evolutionary experiment. American Journal of Botany. 91(10): 1523-1534. [C,L]

Hackett, J. D., L. Maranda, H. S. Yoon, and D. Bhattacharya. 2003. Phylogenetic evidence for the cryptophyte orgin of the pastid of Dinophysis (Dinophysiales, Dinophyceae). Journal of Phycology. 39: 440-448.

Hackett, J. D., H. S. Yoon, S. Li, A. Reyes-Prieto, S. E. Rummele, and D. Bhattacharya. 2007. Phylogenomic analysis supports the monoplyly of Cryptophytes and Haptophytes and the association of Rhizaria with Chromalveolates.  Molecular Biology and Evolution.  24(8): 1702-1713. [C]

Hackett, S. J., R. T. Kimball, S. Reddy, R. C. K. Bowie, E. L. Braun, M. J. Braun, J. L. Chojnowski, W. A. Cox, K-L. Han, J. Harshman, C. J. Huddleston, B. D. Marks, K. J. Miglia, W. S. Moore, F. H. Sheldon, D. W. Sreadman, C. C. Witt, and T. Yuri. 2008. A phylogenomic study of birds reveals their evolutionary history. Science. 320: 1763-1768. [C,L]

Hackstein, J. H. P. 2010. Anaerobic Ciliates and Their Methanogenic Endosymbionts. Symbiotic Methanogenic Archaea. [C]

Hackstein, J. H. P., A. H. A. M. van Hoek, J. A. M. Leunissen, and M. Huynen. 2002, Anaerobic ciliates and their methanogenic endosymbionts: In: Seckbach, J. (ed.), Symbiosis: Mechanisms and Model Systems. Kluwer Academic Publishers, Dordrecht, The Netherlands.

Hackstein, J. H. P., U. Mackenstedt, H. Mehlhorn, J. Meijerink, H. Schubert, and J. A. M. Leunissen. 1995, Parasitic apicomplexans harbor a chlorophyll a-D1 complex, the potential target for therapeutic triazines: Parasitol. Res. 81 207–216. 

Hadding, A. 1913. Undre Dicellograptusskiffern I Skane Jamte Nagre Darmet Ekivalenta Bildninger. Lunds Universitets Arsskrift, N. F. 9: 1–90.

Haeckel, E. 1866. Generelle Morphologie der Organismen. Georg Reimer, Berlin.

Haeckel, E. 1878. Das Protistenreich. Eine populäre Übersicht über das Formengebiet der niedersten Lebewesen. Mit einem wissenschaftlichen Anhang: System der Protisten. Ernst Günther. Leipzig.

Hagen, E. H. and G. A. Bryant.  2003.  Music and dance as a coalition signaling system.  Human Nature.  14(1): 21-51.

Hagen, E. H. and P. Hammerstein.  Did neanderthals and other early humans sing?  Seeking the biological roots of music in the territorial advertisements of primates, lions, hyenas, and wolves.  1-14.

Hagopian, J.C., M. Reis, J.P. Kitajima, D. Bhattacharya, and M.C. de Oliveira. 2004. Comparative analysis of the complete genome sequence of the red alga Gracilaria tenuistipata var. liui provides insight into the evolution of rhodoplasts s and their relationship to other plastids. Journal of Molecular Evolution. 59:464-477. [C]

Hagström, Å., F. Azam, A. Andersson, J. Wikner,  and F. Rassoulzadegan. 1988. Microbial loop in an oligotrophic pelagic marine ecosytem: possible roles of cyanobacteria and nanoflagellates in the organic fluxes. Mar. Ecol. Prog. Ser. 49:171-178.

Haig, D. 1999. Genetic conflicts of pregnancy and childhood. In: Sterns, S., ed. Evolution of Health and Disease. Oxford University Press. New York. pp. 77–90.

Haile-Selassie, Y., B. Z. Saylor, A. Deino, N. E. Levin, M. Alene, and B. M. Latimer. 2012. A new hominin foot from Ethiopia shows multiple Pliocene bipedal adaptations. [C]

Haile-Selassie, Y., G. Suwa, and T. D. White. 2004. Late Miocene teeth from Middle Awash, Ethiopia, and early hominid dental evolution. Science. 303: 1503–1505.

Hairapetian, V., H. Blom, and C. G. Miller. 2008. Silurian thelodonts from the Niur Formation, central Iran. Acta Palaeontologica Polonica. 53(1): 85-95. [C]

Hajibabaei, M., J. Xia, and G. Drouin. 2006. Seed plant phylogeny: gentophytes are derived confiers and a sister group to Pinaceae. Molecular Phylogenetics and Evolution. 40: 208-217. [C]

Halanych, K. M. 1995. The phylogenetic position of the pterobranch hemichordates based on 18S rDNA sequence data. Molecular phylogenetics and evolution 4(1): 72-76. 

Halanych, K. M. 1996. Testing hypotheses of chaetognath origins: long branches revealed by 18S ribosomal DNA. Systematic Biology 45:223-246.

Halanych, K. M. 2004. The new view of animal phylogeny. Annual Review of Ecology Evolution and Systematics. 35:229-256. [C,L]

Halanych, K. M. 2015. The ctenophore lineage is older than sponges? That cannot be right! Or can it? The Journal of Experimental Biology. 218: 592-597.

Halanych, K. M., T. G. Dahlgren and D. McHugh. 2002. Unsegmented annelids, possible origins of four lophotrochozoan worm taxa. Integ. aand Comp. Biol. 42: 678-684. 

Halanych, K. M. and Y. Passamaneck. 2001. A Brief Review of Metazoan phylogeny and future prospects in Hox-Research. Amer. Zool. 41: 629-639. 

Halanych, K. M., R. A. Feldman, and R.C. Vrijenhoek. 2001. Molecular Evidence that Sclerolinum brattstromi is closely related to Vestimentiferans, not to Frenulate Pogonophorans (Siboglinidae, Annelida). Biol. Bull. 201: 65-75. 

Halanych, K. M., J. D. Bacheller, A. M. A. Aguinaldo, S. M. Liva, D. M. Hillis, and J. A. Lake. 1995. Evidence from 18S ribosomal DNA that the lophophorates are protostome animals. Science 267: 1641-1643. [C,L]

Hale, M. E. 1979. How to Know the Lichens. 2nd ed. Wm.C. Brown Publishers. Dubuque, IA.

Hales, D.F. 2001. The Hexapoda. In: Anderson, D.T., ed. Invertebrate Zoology. Oxford University Press. Oxford, UK. pp. 232-271.[L]

Hall, B. K. 2003. Descent with modification: the unity underlying homology and homoplasy as seen through an analysis of development and evolution. Biological Reviews. 78409-433.

Hall, J. A., D. P. Barrett, and M. R. James. 1993. The importance of phytoflagellate, heterotrophic flagellate and ciliate grazing on bacteria and picophytoplankton sized prey in a coastal marine environment. J. Plank. Res. 15:1075-1086.

Hall, J. D., R. M. McCourt, and C. F. Delwiche. 2008. Patterns of cell division in the filamentous Desmidiaceae, close green algal relatives of land plants. American Journal of Botany. 95(6): 643-654. [C]

Hallböök, F. 1999.  Evolution of the vertebrate neurotrophin and Trk receptor gene families. Current Opinion in Neurobiology. 9(5):616-621. [C]

Hallegraeff, G. M. 1993. A review of harmful algal blooms and their apparent global increase. Phycologia. 32 79–99. 

Hallegraeff, G. M. and Y. Hara. 2003. Taxonomy of harmful marine raphidophytes. In: G. M. Hallegraeff, D. M. Anderson, and A. D. Cembella, eds. Manual on Harmful Marine Microalgae.  UNESCO Publishing. Paris, France. pp. 511–522.

Hallegraff, G. M. and I. A. N. Lucas.  1988.  The marine dionflagellate genus Dinophysis (Dinophyceae): photosynthetic, neritic and non-photosynthetic, oceanic species. Phycologia. 27: 25-42.  

Hallstrom, B. M., M. Kullberg, M. A. Nilsson, and A. Janke. 2007. Phylogenomic Data Analyses Provide Evidence that Xenarthra and Afrontheria Are Sister Groups. Department of Cell and Organism Biology, Division of Evolutionary Molecular Systems, University of Lund, Sweden, p. 2060-2068.

Halstead, L. B. 1973. The heterostracan fishes. Biol. Rev. 48: 279-332. 

Halstead, L. B. 1985. The vertebrate invasion of fresh water. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences. 309: 243-258. [C]

Halstead, L. B., Y. H. Liu, K. P’an. 1979. Agnathans from the Devonian of China. Nature. 282:831-833. [C] 

Hamann, E., H. Gruber-Vodicka, M. Kleiner, H.E. Tegetmeyer, D. Riedel, S. Littmann, J. Chen, J. Milucka, B. Viehweger, K.W. Becker, X. Dong, C.W. Stairs, B. Viehweger, K.W. Becker, A.J. Roger, and M. Strous. 2016.Environmental Breviatea harbor mutualistic Acrobacter epibionts. Nature. 534: 254-258.

Hamby, R.K. and E.A. Zimmer. 1992. Ribosomal RNA as a phylogenetic tool in plant systematics. In: P.S. Soltis, D.E. Soltis, and J.J. Doyle, eds. Molecular systematics of plants. Chapman and Hall. New York . pp. 50-91. 

Hammond, P. M. 1995, Described and estimated species numbers: an objective assessment of current knowledge: In: Allsopp, D., Colwell, R. R. & Hawksworth, D. L. (ed.), Microbial Diversity and Ecosystem Function. CAB International, Wallingford , UK , p. 29–71.

Hampl, V., L. Hug, J. W. Leigh, J. B. Dacks, B. F. Lang, A. G. B. Simpson, and A. J. Roger. 2009. Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”. Proceedings of the National Academy of Science. 106(10): 3859-3864. [C]

Hampl, V., J. D. Silberman, A. Stechmann, S. Diaz-Trivino, P. J. Johnson, and A. J. Roger. 2008. Genetic evidence for a mitochondriate ancestry in the amitochondriate flagellate Trimastix pyriformis. PLoS ONE. 3(1): e1383. doi:10.1371/journal.pone.0001383. 

Han, J., J. Liu, Z. Zhang, X. Zhang, and D. Shu. 2007. Trunk ornament on the palaeoscolecid worms Cricocosmia and Tabelliscolex from the Early Cambrian Chengjiang deposits of China. Acta Palaeontologica Polonica. 52(2):423-431. 

Hand, E. 2013. The patchwork array. 2013. Nature. 495:156-159.

Han, Y., K. Gasic, B.Marron, J.E. Beever, and S.S. Korban. 2007. A BAC-based physical map of the apple genome. Genomics 89: 630-637. 

Hanna, E., F. J. Navarro, F. Pattyn, C. M. Domingues,  X. Fettweis, E. R. Ivins, R. J. Nicholls, C. Ritz, B. Smith, S. Tulaczykl, P. L. Whitehouse, and H. J. Zwally. 2013. Ice-sheet mass balance and climate change. Nature. 498:51-598

Hanelt B., D. VanSchyndel, C. M. Adema, L. A. Lewis, E. S. Loker. 1996. The phylogenetic position of Rhopalura ophiocomae (Orthonectida) based on 18S ribosomal DNA sequence analysis. Molecular Biology and Evolution 13:1187-1191[C].

Hanke, G. F. 2002. Paucicanthus vanelsti gen. et sp. nov., an Early Devonian (Lochkovian) acanthodian that lacks paired fin spines. Canadian Journal of Earth Sciences. 39:1071-1083.

Hanke, G. F. 2008. Promesacanthus eppleri n. gen., n. sp., a mesacanthid (Acanthodii, Acanthodiformes) from the Lower Devonian of northern Canada. Geodiversitas. 30(2): 287-302. [C]

Hanke, G. F. and M. V. H. Wilson. 2004. New teleostome fishes and acanthodian systematics. In: Arratia, G., M. V. H. Wilson, and R. Cloutier, eds. Recent Advances in the Origin and Early Radiation of Vertebrates. Verlag Dr. Friedrich Pfeil. München, Germany. pp. 189-216.

Hanke, G. F. and M. V. Wilson. 2006. Anatomy of the Early Devonian Acanthodian Brochoadomones Milesi Based on Nearly Complete Body Fossils, with Comments on the Evolution and Development of Paired Fins. Journal of Vertebrate Paleontology. 26(3): 526-537.

Hansen, B., S. Christiansen, and G. Pedersen. 1996. Plankton dynamics in the marginal ice zone of the central Barents Sea during spring: carbon flow and structure of the grazer food chain. Polar Biology. 16:115-128

Hansen, P. J., A. D. Cembella, and Ø. Moestrup. 1992. The marine dinoflagellate Alexandrium ostenfeldii: paralytic shellfish toxin concentration, composition, and toxicity to a tintinnid ciliate. Journal of Plankton Research. 28:597–603.

Hanson, D. T, T. J Andrews, and M. R Badger. 2004, [Abstract] Evidence for a pyrenoid-based CO₂-concentrating mechanism in hornworts using membrane-inlet mass spectrometry. Botany 2004: Abstracts, Scientific Meeting, p. 42: Botanical Society of America, Snowbird, UT.

Hansen, F.C. H.J. Witte, and J. Passarge. 1996. Grazing in the heterotrophic dinoflagellate Oxyrrhis marina: size selectivity and preference for calcified Emiliania huxleyi cells. Aquat. Microb. Ecol. 10:307-313.

Hansmann, S., Martin, W., 2000. Phylogeny of 33 ribosomal and six other proteins encoded in an ancient gene cluster that is conserved across prokaryotic genomes: Influence of excluding poorly alignable sites from analysis. International Journal of Systematic and Evolutionary Microbiology. 50: 1655-1663. [C]

Hanson, E.D. 1976. Major Evolutionary Trends in Animal Protists. J. Protozool. 23(1):  4-12. [C]

Hannaert, V., E. Saavedre, F. Duffieux, J-P. Szikora, D.J. Rigden, P. A.M. Michels, and F.R. Opperdoes. 2003. Plant-like traits associated with metabolism of Trypanosoma parasites.  Proceedings of the National Academy of Sciences , USA 100: 1067-1071. [L]

Hao, G., M.-L. Chye, and R. M. K. Saunders. 2001. A phylogenetic analysis of the Schisandraceae based on morphology and nuclear ribosomal ITS sequences. Botanical Journal of the Linnean Society. 135:401-411.

Hao, G., R. M. K. Saunders, and M.-L. Chye. 2000. A phylogenetic analysis of the Illiciaceae based on sequences of internal transcribed spacers (ITS) of nuclear ribosomal DNA. Plant Systematics and Evolution 223:81-90.

Hara, S., Terauchi, K., and I. Koike. 1991. Abundance of viruses in marine waters: assessment by epifluorescence and transmission electron microscopy. 57:2731-2734.  

Harada, A., S. Ohtsuka, and T. Horiguchi. 2007. Species of the Parasitic Genus Duboscquella are Members of the Enigmatic Marine Alveolate Group I. Protist. 158:  337-347. [C,L]Harcourt, A. H. and K. J. Stewart. 2007. Gorilla Society: Conflict, Compromise, and Cooperation Between the Sexes. University of Chicago Press. Chicago.

Harcourt-Smith, W. E. and L. C. Aiello. 2004. Fossils, feet and the evolution of human bipedal locomotion. Journal of Anatomy. 204: 403-416. [C]

Harder, W. and L.  Dijkhuizen. 1983. Physiological responses to nutrient limition. Ann. Rev. Microbiol. 37:1-23.

Hardisty, M. W. 1982. Lampreys and hagfishes: analysis of cyclos­tome relationships. In: M. W. Hardisty and I. C. Potter. The Biology of Lampreys, Vol 4B. Academic Press. London. pp. 165–260.

Hardisty, M. W. 2007. Life Without Jaw. Forrest Text. Ceredigion.

Hardie, G. 1990. Flights of fancy. Nature. 348:208-209. [C,L]

Hardy, A. C. 1953. On the Origin of the Metazoa. Quarterly Journal of Microscopical Science. 94 (4): 441- 443.

Harpel, J. 2004, [Abstract] Conservation and management of rare bryophytes on USFS and BLM lands in the Pacific Northwest. Botany 2004: Abstracts, Scientific Meeting, p. 24: Botanical Society of America, Snowbird, UT.

Harper, G. H., D. G. Mann, and R. Thompson. 2004. Phenological monitoring at Royal Botanic Garden Edinburgh. Sibbaldia. 2: 33–45.

Harper J. T. and P. J. Keeling. 2003. Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids. Molecular Biology and Evolution. 20: 1730-1735

Harper, J. T. and G. W. Saunders. 2001. Molecular systematics of the Florideophyceae (Rhodophyta) using nuclear large and small subunit rDNA sequence data. Journal of Phycology 37: 1073-1073. [L]

Harper J. T. and G. W. Saunders. 2002. A re-classification of the Acrochaetiales based on molecular and morphological data, and establishment of the Colaconematales ord. nov. (Florideophyceae, Rhodophyta). European Journal of Phycology. 37: 463-463. [C]

Harper J. T. G. W. Saunders In press Contemporary perspectives on florideophyte red algal systematics (Florideophyceae, Rhodophyta). In A. K. Sharma and A. Sharma [eds.], Plant genome: biodiversity and evolution, vol 2., Cryptogams. Science Publishers Inc., Enfield , New Hampshire , USA

Harper, J.T., and P.J. Keeling. 2003. Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids. Molecular Biology and Evolution. 20: 1730-1735.

Harper, J. T., E. Waanders, and P.J. Keeling. 2005. On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes. International Journal of Systematic and Evolutionary Microbiology. 55: 487-496. [C]

Harris, A. G., J. E. Repetski, N. R. Stamm, D. J. Weary. 1995. Conodont age and CAI data for New Jersey. U.S. Geological Survey Open File Report. 95–557: 1–31.

Harris, E. S. J. 2004, [Abstract] Phylogenetic relationships and flavonoid evolution in the moss genus Plagiomnium Kop. Botany 2004: Abstracts, Scientific Meeting, p. 37: Botanical Society of America, Snowbird, UT.

Harris, R. H. and R. Mitchell. 1973. The role of polymers in microbial aggregation.

Harris, R. W. 1962. Subgenera of the conodont genus Multioistodus in Simpson-Burgen (Ordovician Arbuckle). Oklahoma Geological Notes. 25: 34–47.

Harris, R. W. and R. V. Hollingsworth. 1933. New Pennsylvanian conodonts from Oklahoma. American Journal of Science. 25: 193–204.

Harrison, F. W., and J. O. Corliss. editors. 1991. Protozoa: In: Harrison, F. W. (ed.), Microscopic anatomy of invertebrates, Vol. 1. Wiley-Liss , New York .

Harshman, J., C. J. Huddleston, J. P. Bollback, T. J. Parson, and M. J. Braun.  2003.  True and false gharials: a nuclear gene phylogeny of Crocodylia.  Systematic Biology.  52(3): 386-402.

Hart, J. 1987. A cladistic analysis of conifers: preliminary results. Journal of the Arnold Arboretum 68: 269-307.

Hartmann, H. J. , H. Taleb, L. Aleya, and N. Lair. 1993. Predation On Ciliates By the suspension-feeding Calanoid Copepod Acanthodiaptomus denticornis. Can. J. Fish. Aquat. Sci. 50: 1382-1393.

Hartwig, W. C. 2002. The Primate Fossil Record.  Cambridge University Press. Cambridge.

Harvati, K.  2003.  The Neanderthal taxonomic position: models of intra- and inter-specific craniofacial variation.  Journal of Human Evolution.  44: 107-132.

Harvey, P. H. and T. H. Clutton-Brock. 1985. Life history variation in primates. Evolution. 39: 559–581.

Harvey, P. H. and A. F. Read. 1988. How and why do mammalian life histories vary? In: Boyce, M. S., ed. Evolution of Life Histories of Mammals.  Yale University Press. New Haven. pp. 213–232.

Harvey, P. H., R. D. Martin, and T. H. Clutton-Brock. 1987. Life histories in comparative perspective. In: Smuts, B. B., D. L. Cheney, R. M. Seyfarth, R. Wrangham R, and T. T. Struhsaker, eds. Primate Societies.  Chicago University Press. Chicago. pp. 181–196.

Harvey P. H., A. F. Read, and D. E. L. Promislow. 1989. Life history variation in placental mammals: Unifying the data with theory. Oxf Surv Evol Biol. 6: 13–31.

Harvey, T. H. P., X. Dong, and P. C. J. Donoghue. 2010. Are palaeoscolecids ancestral ecdysozoans? Evolution and Development. 12(2):177-200.

Harvey W. H. 1836. Algae. In J. T. Mackay, ed. Flora Hibernica, vol. 2. Curry. Dublin, Ireland. pp. 157-256.

Harzsch, S. and A. Wanninger. 2010. Evolution of invertebrate nervous systems: the Chaetognatha as a case study. Acta Zoologica. 91: 35-43. [C]

Harzsch, S., and C. HG Muller. 2007. A new look at the ventral nerve centre of Sagitta: implications for the phylogenetic position of Chaetognatha (arrow worms) and the evolution of the bilaterian nervous system. Frontiers in Zoology. 4:14.

Hasebe, M. 2004, [Abstract] Molecular mechanisms in the evolution of land plant body plan, p. 7: In K. Iwatsuki (org.), International Symposium 2004: Asian Plant Diversity and Systematics. National Museum of Japanese History, Sakura, Japan.

Hasebe, M. 2004, [Abstract] Physcomitrella patens as an indispensable model for EvoDevo studies, p. 6: In R. Reski (org.), Abstract Book: Moss 2004, The 7th Annual Moss International Conference. Plant Biotechnology, University of Freiburg, Freiburg, Germany.

Hasegawa, J. 1988. A proposal for a new system of the Anthocerotae, with a revision of the genera. J. Hattori Bot. Lab 64:87-95.

Hasegawa, J. 1990.  Autofluorescence of elaters in the Anthocerotae and its taxonomic significance.   Journal of the Hiraoka Environmental Science Laboratory 3:1-9.

Hasegawa, J. 1994. New classification of Anthocerotae. Journal of the Hattori Botanical Lab 76: 21-

Hasegawa, M. and T. Hashimoto. 1999. Phylogenetic position of amitochondriate protists in the evolution of eukaryotes. Biology Bulletin. 196: 389-392. [C]

Hasegawa, M., T. J Hashimoto, N. Adachi,  N. Iwabe, and T. Miyata. 1993. Early branchings in the evolution of eukaryotes: ancient divergence of Entamoeba that lacks mitochondria revealed by protein sequence data. Journal of Molecular Evolution 36: 380-388. 

Hass, W. H. 1959. Conodonts from the Chappel Limestone of Texas. U. S. Geological Survey Professional Paper. 294-J: 365–399.

Hass, W. H., W. Häntzschel, D. W. Fisher, B. F. Howell, F. H. T. Rhodes, K. J. Müller, and R. C. Moore. 1962.  In: Moore, R. C., ed. Treatise on Invertebrate Paleontology, Part W, Miscellanea. Geological Society of America and the University of Kansas Press. Lawrence. pp. W1–W259.

Hässel de Menéndez, G. G. 1986.  Leisporoceros Hässel n. gen. and Leiosporocerotaceae Hässel n. fam. of Anthocerotopsida.  Journal of Bryology. 14: 255-259.

Hässel de Menéndez, G. G. 1988. A proposal for a new classification of the genera within the Anthocerotophyta. Journal of the Hattori Botanical Lab. 64: 71-86.

Haszprunar, G. 1996. Plathelminthes and Plathelminthomorpha-paraphyletic taxa. Journal of Zoological Systematics and Evolutionary Research. 34: 41-48. [C]

Hatschek, B. 1888. Lehrbuch der Zoologie, 1. Lieferung. Gustav Fischer. Jena. pp. 1–144.

Haupt, B. J., and D. Seidov.  2012.  Modeling geologically abrupt climate changes in the Miocene: Potential effects of high-latitudinal salinity changes.  Natural Science.  4(3): 149-158.

Hausdorf, B., M. Helmkampf, A. Meyer, A. Witek, H. Herlyn, I. Bruchhaus, T. Hankeln, T. H. Struck, and B. Lieb. 2007. Spiralian, phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta. Mol. Biol. Evol. 24(12): 2723-2729. [C]

Hausdorf, B., M. Helmkampf, M.P. Nesnidal, I. Bruchhaus. 2009. Phylogenetic relationships within the lophophorate lineages (Ectoprocta, Brachiopoda and Phoronida). 55: (1121-1127).

Haufler, C.H., W.A. Grammer, E. Hennipman, T. A. Ranker, A.R. Smith, and H. Schneider. 2003. Systematics of the ant-fern genus Lecanopteris (Polypodiaceae): testing phylogenetic hypotheses with DNA sequences. Systematic Biology 28: 217-227. [C]

Hausmann, K., and B. P. Kremer. 1994. Extremophile Mikroorganismen in ausgefallenen Lebensäumen. VCH. Weinheim.

Hausmann, K., and N. Hülsmann. 1996. Protozoology: 2nd ed., Georg Thieme. Stuttgart.

Hausmann, K., and N. Hülsmann. 1999. On the actual understanding of the evolution and phylogeny of eukaryotes and its consequences for protozoan systematics. Cour. Forsch.-Inst. Senckenberg. 215 111–122. 

Hausmann, K., and P. C. Bradbury, eds. 1996. Ciliates: cells as organisms. G. Fischer. Stuttgart.

Hawkes, K. 2003. Grandmothers and the evolution of human longevity. Am J Hum Biol. 15: 380–400.

Hawkes, K. 2006a. Life history theory and human evolution: A chronicle of ideas and findings. In: Hawkes, K. and R. R. Paine, eds. The Evolution of Human Life History. School of American Research Press. Santa Fe. pp. 45–93.

Hawkes, K. 2006b. Slow life histories and human evolution. In: Hawkes, K. and R. R. Paine, eds. The Evolution of Human Life History. School of American Research Press. Santa Fe. pp. 95–126.

Hawkes, K. and N. J. Blurton Jones. 2005. Human age structures, paleodemography, and the grandmother hypothesis. In: Voland, E., A. Chasiotis, and W. Schiefenhovel, eds. Grandmotherhood: The Evolutionary Significance of the Second Half of Female Life. Rutgers University Press. New Brunswick. pp. 118–140.

Hawkes, K., J. F. O’Connell, N. G. Blurton Jones,  E. L. Charnov, and H. Alvarez. 1998. Grandmothering, menopause, and the evolution of human life histories. Proc Natl Acad Sci USA. 95: 1336–1339.

Hawks, J. 2013. Twisting the tale of human evolution. Nature. 495: 172.

Hawkins, J. A. 2000. A survey of homology assessment: different botanists perceive and define characters in different ways.  In: Scotland, R. and R. T. Pennington, eds. Homology and Systematics: Coding Characters for Phylogenetic Analysis. Taylor and Francis, London. pp. 22–53.

Hawkins, J. H., C. E. Hughes, and R. W. Scotland. 1997. Primary homology assessment, characters and character states. Cladistics. 13: 275–283.

Hawksworth, D.L. 1981. The lichenicolous Coelomycetes. Bulletin of the British Museum of Natural History (Botany). 9(1): 1-98. [C]

Hawksworth, D.L. 2001. The magnitude of fungal diversity: the 1.5 million species estimate revisited. Mycological Research. 105(12): 1422-1432. [C]

Hawksworth, D.L., P.W. James, and B.J. Coppins. 1980. Checklist of British lichen-forming, lichenicolous and allied fungi. Lichenologist. 12(1): 1-115. [C]

Hawksworth, D. L., J. McNeill, P. H. A. Sneath, R. P. Trehane, and P. K. Tubbs. 1994, Towards a harmonized bionomenclature for life on Earth. Bull. Zool. Nomencl. 51 188–216. 

Hawthorn, J. R., M. V. H. Wilson, and A. B. Falkenberg. 2008. Development of the dermoskeleton in Superciliaspis gabrielsei (Agnatha: Osteostraci). Journal of Vertebrate Paleontology 28(4): 951-960. [C]

Havskum, H. and A. S.  Hansen. 1997. Importance of pigmented and colorless nano-sized protists as grazers on nanoplankton in a phosphate-depleted Norwegian fjord and in enclosures. Aquat. Microb. Ecol. 12:139-151.

Hay, O. P. 1910. On the manner of locomotion of the dinosaurs especially Diplodocus, with remarks on the origin of the birds. Proceedings of the Washington Academy of Sciences. 12(1): 1-25. [C]

Hayden, E. C. 2013. Data barriers limit genetic diagnosis. Nature. 494:156-157.

Hayden, E. C. 2013. Gene sequencing leaves the laboratory. Nature. 484:290-291.

Hays, L. E., K. Grice, C. B. Foster, and R. E. Summons.  2012.  Biomarker and isotopic trends in a Permian-Triassic sedimentary section at Kap Stosch, Greenland.  Organic Geochemistry.  43: 67-82. 

He-Nygren, X., A. Juslen, I. Ahonen, D. Glenny, and S. Piippo. 2006. Illuminating the evolutionary history of liverworts (Marchantiophyta)-towards a natural classification. Cladistics. 22: 1-31.

He, Si, and E De Luna. 2004, The genus Braunia (Bryopsida, Hedwigiaceae) in China: THE BRYOLOGIST. 107 373–376. 

Head, III, J. W., C. I. Fassett, D. J. Kadish, D. E. Smith, M. T. Zuber, G. A. Neumann, and E. Mazarico. 2010. lobal distribution of large lunar craters: implications for resurfacing and impactor populations. Science. 329: 1504-1507. [C]

Healey, J.M. 2001. The Mollusca. In: Anderson, D.T., ed. Invertebrate Zoology. Oxford University Press. Oxford, UK. pp. 121-169.[L]

Heaney, S. I., J. W. G. Lund, H. M. Canter, and K. Gray. 1988. Population dynamics of Ceratium spp. in three English lakes, 1945–1985. Hydrobiology. 161:133–148. 

Heath, I. B. 1981. An investigation of protistan phylogeny using a numerical taxonomy (cluster) analysis of mitotic systems. BioSystems. 14:261-270. [C]

Heath, I. B. and W. M. Darley. 1972. Observations on the ultrastructure of the male gametes of Biddulphia levis Ehr. Journal of Phycology. 18: 51-59.

Heatwole, H. and R. L. Carroll. 2002. Amphibian Biology Vol 4. Paleantology. The Evolutionary History of Amphibians. Copeia. 1: 254-257.

Heckman, D. S., D. M. Geiser, B. R. Eidell, R. L. Stauffer, N. L. Kardos, and S. B. Hedges. 2001.  Molecular evidence for the early colonization of land by fungi and plants.  Science. 293: 1129-1133. [L]

Hedderson, T. A., R. Chapman, and C. J. Cox. 1998. Bryophytes and the origins and diversification of land plants: new evidence from molecules.  In: Bates, J. W.,  N. W. Ashton, and J. G. Duckett, eds. Bryology for the Twenty-first Century. British Bryological Society. Pp. 65-77.

Hedderson, T.A., R.L. Chapman, and W.L. Rootes. 1996. Phylogenetic relationships of bryophytes inferred from nuclear-encoded rRNA gene sequences. Plant Systematics and Evolution. 200:213-224. [C]

Hedderson, T.A, D.J. Murray, C.J. Cox, and T.L. Nowell. 2004. Phylogenetic relationships of Haplolepideous mosses (Dicranidae) inferred from rps4 gene sequences. Systematic Botany 29(1):29-41. [C]

Hedenäs, L. 2004, [Abstract] Morphological characters and their use in pleurocarp systematics, p. 29: In A. E. Newton, R. Tangney & E. DeLuna (orgs.), Pleurocarpous Mosses: Systematics and Evolution. National Museums & Galleries of Wales, Cardiff, Wales.

Hedenäs, L, I Bisang, and N Schnyder. 2003, The distribution of bryophytes in Switzerland and Liechtenstein. IV. Hamatocaulis and Pseudocalliergon: Botanica Helvetica. 113 111–124. 

Hedenäs, L, B. C Tan, I Bisang, and C Hammarberg. 2004, Habitat preferences in Acroporium (Sematophyllaceae) and related taxa in Peninsular Malaysia: THE BRYOLOGIST. 107 550–565. 

Hedenäs, L, and A Vanderpoorten. 2004, [Abstract] The Amblystegiaceae, p. 26: In A. E. Newton, R. Tangney & E. DeLuna (orgs.), Pleurocarpous Mosses: Systematics and Evolution. National Museums & Galleries of Wales, Cardiff, Wales.

Hedges, J. I, G. L. Cowie, J. E.  Richey, P. D.  Quay, R. Benner, M. Strom, and B. Forsberg. 1994. Origins and processing of organic matter in the Amazon River as indicated by carbohydrates and amino acids. Limnol. Oceangr. 39:743-761.

Hedges, J. I. 1988. Polymerization of humic substances in natural environments. pp 45-58 In: F.H. Frimmel & R.F. Christman, eds., Humic Substances and Their Role in the Environment. John Wiley & Sons, Ltd.

Hedges, S. B. 2001. Afrotheria: Plate tectonics meets genomics. Proceedings of the National Academy of Science 98: 1-2. [C]

Hedges, S. B. 2001. Molecular evidence for the early history of living vertebrates. In: P. E. Ahlberg, ed. Major Events in Early Vertebrate Evolution. Taylor and Francis. London. pp 119–134.

Hedges, S. B., H. Chen, S. Kumar, D. Y.-C. Wang, A. S. Thompson, and H. Watanabe. 2001. A genomic timescale for the origin of eukaryotes. BMC Evolutionary Biology 1:4. [C]

Hedrick, R. P., D.V. Baxa, P. De Kinkelin, and B. Okamura. 2004. Malacosporean-like spores in urine of rainbow trout react with antibody and DNA probes to Tetracapsuloides bryosalmonae. Parasitology Research. 92:81-88. [C].

Heger, T. J., J. Pawlowksi, E. Lara, B. S. Leander, M. Todorov, V. Golemansky, and E. A. D. Mitchell.  2010.  Comparing potential COI and SSU rDNA barcodes for assessing the diversity and phylogenetic relationships of cyphoderiid testate amoebae (Rhizaria: Euglyphida).  Protist.  doi:10.1016/j.protis.2010.05.002.  

Hehenberger, E., D.V. Tikhonenkov, A.P. Mylnikov, and P.J. Keeling. 2017. Novel predators reshape holozoan phylogeny and  reveal the presence of a two-component signaling system in the ancestor of animals. Current Biology. 27:2043-2050.

Heider, F., Bock, J., Hendy, I., Kennet, J.P., Matzka, J., Schneider, J. 2001. Latest quaterary rock magnetic record of climatic and oceanic change, Tanner Basin, California borderline. Geological Society of America Bulletin. 113(3). 346-359 [C][L]

Heimberg, A.M., R. Cowper-Sal-lari, M. Semon, P.C.J. Donoghue, and K. J. Peterson. 2010. MicroRNAs reveal the interrelationships of hagfish, lampreys, and gnathosomes and the nature of the ancestral vertebrate. 107 (45): 19379-19383. 

Heimberg, A. M., L. F. Sempere, V. N. Moy, P. C. J. Donoghue, and K. J. Peterson. 2008. MicroRNAs and the advent of vertebrate morphological complexity. Proceedings of the National Academy of Sciences, USA. 105: 2946-2950. [C]

Heinbokel, J. F. and J. R. Beers. 1979. Studies on the Functional Role of Tintinnids int he Southern California Bight. III. Grazing Impact of Natural Assemblages. Marine Biology 52:23-32.

Heinrichs, J, H Groth, and M Sauer. 2004, New synonyms in Plagiochila (Hepaticae) III: Cryptogamie Bryologie. 25: 35–37. 

Heinrichs, J, M Lindner, and H Groth. 2004, [Abstract] Origin and subdivision of Plagiochila in Africa, p. 11: In S. R. Gradstein, J. Heinrichs & R. Wilson (orgs.), Bryophylogeny 2004. 10–12 September. Second International Symposium on Molecular Systematics of Bryophytes. Albrecht von Haller Institute of Plant Sciences, Göttingen, Germany.

Heinrichs, J, M Lindner, and H Groth. 2004, Sectional classification of the North American Plagiochila (Hepaticae, Plagiochilaceae): The Bryologist. 107: 489–496. 

Heiss, A.A., W.J. Lee, K. Ishida, and A.G.B. Simpson. 2015. Cultivation and characterisation of new species of apusomonads (the sister group of to opisthokonts), including close relatives of Thecamonas (Chelonemonas n. gen.). Journal of Eukaryotic Microbiology. 62:637-649.

Heiss, A. A., G. Walker, and A. G. B. Simpson. 2010. The Ultrastructure of Ancyromonas, a Eukaryote without Supergroup Affinities. Protist. 162: 373-393. [C]

Heissenberger, A. and Herndl, G.J. 1994. Formation of high molecular weight material be free-living marine bacteria. Mar. Ecol. Prog. Ser. 111:129-135.

Hejnol, A. 2010. A twist in time-the evolution of spiral cleavage in the light of aminal phylogeny. Integrative and Comparative Biology. published online (doi:10.1093/icb/icq103) [C]

Hejnol, A. and M. Q. Martindale. 2008a. Acoel development indicates the independent evolution of the bilaterian mouth and anus. Nature. 456: 382-386. [C, L]

Hejnol, A. and M. Q. Martindale. 2008b. Acoel development supports a simple planula-like urbilaterian. Philosophical Transactions of The Royal Society B. 363: 1493-1501. [C]

Hejnol, A., M. Obst, A. Stamatakis, M. ott, G. W. Rouse, G. D. Edgecombe, P. Martinez, J. Baguña, X. Bailly, U. Jondelius, M. Wiens, W. E. G. Müller, E. Seaver, W. C. Wheeler, M. Q. Martindale, G. Giribet, and C. W. Dunn. 2009. Assessing the root of bilaterian animals with scalable phylogenomic methods. Proceedings of The Royal Society B. published online (doi:10.1098/rspb.2009.0896) [C]

Helander, J. and Mollers, P. 2001. Phylogeny of gymnosperms: fact and fiction. Unpublished. Copenhagen, Denmark. [C]

Helfman, G. S., B. B. Collette, and D. E. Facey. 1997. The Diversity of Fishes.  Blackwell Science, Inc. Malden, Mass.

Helgason, T., I. J. Watson, and J. P. W. Young. 2003. Phylogeny of the Glomerales and Diversisporales (Fungi: Glomeromycota) from actin and elongation factor 1-alpha sequences. FEMS Microbiology Letters. 229: 127-132. [C]

Helgen, K. M. 2003. (Review) Major mammalian clades: a review under consideration of molecular and palaeontological evidence. Mammalian Biology 68: 1-15. [C]

Helle, S., V. Lummaa, and J. Jokela. 2005. Are reproductive and somatic senescence coupled in humans? Late, but not early, reproduction correlated with longevity in historical Sami women. Proc R Soc Lond B. 272: 29–37.

Helmchen, T. A., D. Bhattacharya, and M. Melkonian. 1995. Analyses of ribosomal RNA sequences from glaucocystophyte cyanelles provide new insights into the evolutionary relationships of plastids. Journal of Molecular Evolution. 41: 203-210. 

Helmkampf, M., I. Bruchhaus, and B. Hausdorf. 2008a. Phylogenomic analyses of lophophorates (brachiopods, phoronids, and bryozoans) confirm the Lophotrochozoa concept. Proceedings of the Royal Society. B. 275(1645): 1927-1933. [L, C]

Helmkampf, M., I. Bruchhaus, and B. Hausdorf. 2008b. Multigene analysis of lophophorate and chaetognath phylogenetic relationships. Molecular Phylogenetics and Evolution. 46: 206-214. [C]

Hempel, C. G. Scientific Rationality: Analytic vs. Pragmatic Perspectives. Introductory Readings in the Philosophy of Science. Prometheus Books. Amherst, New York. 

Henderson, D. M. 2006. Floating point: a computational study of buoyancy, equilibrium, and gastroliths in plesiosaurs. Lethaia. 39: 227-244.

Hendrichs, M., D. Begerow, R. Bauer, and F. Oberwinkler. 2005. The genus Anthracoidea (Basidiomycota, Ustilaginales): a molecular phylogenetic approach using LSU rDNA sequences. Mycological Research 109(1): 31-40. [C]

Hendricks, J.R. and B.S. Lieberman. 2008. New Phylogenetic Insights into the Cambrian Radiation of Arachnomorph Arthropods. Journal of Paleontology. 82 (3): 585-594.

Hendrix, R. W., J. G. Lawrence, G. F. Hatfull, and S. Casjens. 2000. The origins and ongoing evolution of viruses. Trends in Microbiology. 8(11): 504-508. [C]

Henis, Y., ed. 1987. Survival and dormancy of microorganisms. John Wiley & Sons, New York.

Henn, B. M., C. R. Gignoux, M. Jobin, J. M. Granka, J. M. Macpherson, J. M. Kidd, L. Rodriguez-Botigue, S. Ramachandran, L. Hon, A. Brisbin, A. A. Lin, P. A. Underhill, D. Comas, K. K. Kidd, R. J. Norman, P. Parham, Co. D. Bustamante, J. L. Mountain, and M. W. Feldman.  2011.  Hunter-gatherer genomic diversity suggests a southern African origin for modern humans.  PNAS. 108(13): 5154-5162. 

Henneman, B. and R. T. Dame. 2015. Archaeal histones: dynamic and versatile genome architects. AIMS Microbiology. 1: 72-81.

Hennequin, S., A. Ebihara, M. Ito, K. Iwatsuki, and J-Y. Dubuisson. 2002. Molecular systematics of the fern genus Hymenophyllum s.l. (Hymenophyllaceae) based on chloroplastic coding and noncoding regions. Molecular Phylogenetics and Evolution 27: 283-301. [C]

Hennig, W. 1950. Grundzüge einer Theorie der phylogenetischen Systematik. Deutscher Zentralverlag. Berlin.

Hennig, W. 1966. Phylogenetic Systematics. University of Illinois Press. Urbana. pp. 263.

Hennig, W. 1981. Insect Phylogeny. Wiley. New York.

Hennis, A.S., and C. W. Birkey Jr. 1984. Stochastic Partitioning of chloroplasts at cell division in the alga Olisthodiscus, and compensating control of chloroplast replication. J. Cell Sci. 70:  1-15. [C,L]

Henry, A. G. and B. Wood. 2007. Whose diet? An introduction to the hominin fossil record. In: Ungar, P. S., ed. Evolution of the Human Diet.  Oxford University Press. New York:  pp. 11–28.

He-Nygrén, X., I. Ahonen, A. Juslén, D. Glenny, and S. Piippo. 2004. Phylogeny of liverworts–beyond a leaf and a thallus. Monographs in Systematic Botany from the Missouri Botanical Garden. 98: 87–118. 

He-Nygrén, X., A. Juslén, I. Ahonen, D. Glenny, and S. Piippo. 2004. [Abstract] Evolutionary trends in liverworts, a phylogenetic approach based on multiple gene sequences and morphology. In: S. R. Gradstein, J. Heinrichs and R. Wilson, orgs. Bryophylogeny 2004. 10–12 September. Second International Symposium on Molecular Systematics of Bryophytes. Albrecht von Haller Institute of Plant Sciences, Göttingen, Germany. p. 8.

He-Nygrén, X., A. Juslén, I. Ahonen, D. Glenny, and S. Piippo. 2006. Illuminating the evolutionary history of liverworts (Marchantiophyta)- towards classification. Cladistics. 22:1-31. [C]

Hepper, C.M. Extracellular polysaccharides of soil bacteria. Chapt 5 in ?

Heras, P, and M Infante. s.d, Musgos: La Añoranza del Agua. 16 unnumbered pages: Museo de Ciencias Naturales de Álava, Vitoria, Spain. [A popular introduction to bryophytes, mostly with color photographs.].

Herbert, P.D.N., S. Ratnasingham, and J.R. de Waard. 2003. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proceedings of the Royal Society of London B (Supplement). 270:S96-S99. [C]

Herendeen, P.S., and P.R. Crane. 1995. The fossil history of the monocotyledons. In: P.J. Rudall, P.J. Cribb, D.F. Cutler and C.J. Humphries, eds. Monocotyledons: systematics and evolution. Royal Botanic Garden, Kew. pp. 1-21.

Hermann, E., P. A. Hochuli, H. Bucher, T. Bruhwiler, M. Hautmann. D. Ware, and G. Roohi.  2011.  Terrestrial ecosystems on North Gondwana following the end-Permian mass extinction.  Gondwana Research.  20: 630-637.

Hernandez-Maqueda, D. Quandt, O. Werner, and J. Munoz. Phylogeny and classification of the Grimmiaceae/Ptychomitriaceae complex (Bryophyta) inferred from cpDNA. Molecular Phylogenetics and Evolution 46:863-877. [C]Herndon, J. G., J. Tigges, D. C. Anderson, S. A. Klumpp, and H. M. McClure. 1999. Brain weight throughout the life span of the chimpanzee. J Comp Neurol. 409: 567–572.

Herrera, K. J., J. A. Somarelli, R. K. Lowery, and R. J. Herrera.  2009.  To what extent did neanderthals and modern humans interact?  Biological Reviews.  84: 245-257.

Hershkovitz, M. A. and E. A. Zimmer. 1996. Conservation patterns in angiosperm rDNA ITS2 sequences. Nucleic Acids Research. 24:2857-2867.

Herlyn, H., O. Piskurek, J. Schmitz, U. Ehlers, H. Zischler. 2003. Molecular Phylogenetics and Evolution. 26: 155-164

Hertel, L.A., C.J. Bayne, and E.S. Loker. 2002. The symbiont Capsapora owczarzaki, nov. gen nov. sp. isolated from three strains of the pulmonate snail Biomphalaria glabrata is related to members of the Mesomycetozoa. Int. J. Parasitol. 32:1183-1191.

Hess, S., J-P. Frahm, and I. Theisen. 2005. Evidence of Zoophagy in a Second Liverwort Species, Pleurozia purpurea. The Bryologist. 108(2):  212-218. [C,L]

Hess, S., N. Sausen, M. Melkonian. 2012. Shedding light on vampires: the phylogeny of vampyrellid amoebae revisited. PLoS ONE. 7(2): e31165. doi:10.1371/journal.pone.0031165 

Hesse, C, H Kruijer, D Lutterop, G Kasemir, R Ubels, B Corté, and B. van Gennip. 2004, De mossen van Groninger Waddeneilanden. 2. Rottumeroog, Vuutorendium en Zuiderduin: Buxbaumiella. 66 27–39.

Hesse, M. 2001. Pollen characters of Amborella trichopoda (Amborellaceae): a reinvestigation. International Journal of Plant Sciences. 162:201-208.

Hey, J.  2009.  The divergence of chimpanzee species and subspecies as revealed in multipopulation isolation-with-migration analyses.  Molecular Biology and Evolution.  27(4): 921-933.

Heydari, E., N. Arzani, and J. Hassanzadeh. 2008. Mantle plume: the invisible serial killer-application to the Permian-Triassic boundary mass extinction. Palaeogeography, Palaeoclimatology, Palaeoecology. 264: 147-162. [C]

Heyden, S. V. D., E. E. Chao, K. Vickerman, and T. Cavaleir-Smith. 2004. Ribosomal RNA Phylogeny of Bodonid and Diplonemid Flagellates and the Evolution of Euglenozoa. 2004. Journal of Eukaryote Microbiology. 51(4): 402-416. [C]

 Heyden, Sophie von der and T. Cavalier-Smith. 2005. Culturing and environmental DNA sequencing uncover hidden kinetoplastid biodiversity and a major marine clade within ancestrally freshwater Neobodo designis. International Journal of Systematic and Evolutionary Microbiology. 55:2605-2621. [C]

Heywood, P. 1989. Some affinities of the Raphidiophyceae with other chromophyte algae. In: Green, J.C., B.S.C. Leadbeater, and W.L. Diver, eds. The chromophyte algae: Problems and Perspectives. Systematics Association Special Volume No. 38. Clarendon Press. Oxford . pp. 279-293. [L]

Heywood, P. 1990. Raphidiophyta. In: Margulis, L., J.O. Corliss, M. Melkonian, and D.J. Chapman, eds. 1990. Handbook of the Protoctista; the structure, cultivation, habits and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants and fungi. Jones and Bartlett Publishers. Boston. pp. 318-325. [L]

Heywood P. G. and F. Leedale. 2002. Order Raphidomonadida. In: J. J. Lee, G. F. Leedale, and P. Bradbury, eds. An Illustrated Guide to the Protozoa. 2nd edition.  Society of Protozoologists. Lawrence, Kansas. USA. vol. 2. 744–751.

Heywood, V. H., R. K. Brummitt, A. Culham, and O. Seberg. 2007. Flowering Plant Families of the World. Firefly Books Ltd., Buffalo, NY.

Hibberd, D. J. 1970. Observations on the cytology and ultrastructure of Ochromonas tuberculatus sp. nov. (Chrysophyceae), with special reference to the discobolocysts. British Phycological Journal. 5: 119-143.

Hibberd, D. J. 1976. The ultrastructure and taxonomy of the Chrysophyceae and Prymnesiophyceae (Haptophyceae): a survey with some new observations on the ultrastructure of the Chrysophyceae. Botanical Journal of the Linnean Society. 72: 55-80.

Hibberd, D. J. 1979. The structure and phylogenetic significance of the flagellar transition region in the chlorophyll c-containing algae. BioSystems. 11: 243-261. [C]

Hibberd, D. J. 1980. Prymnesiophytes (=haptophytes). In: Cox, E.R., ed. Phytoflagellates. Elsevier/ North-Holland. New York . Pp. 313-317. [L]

Hibberd, D. J. 1983. Ultrastructure of the colonial colourless zooflagellates Phalansterium digitatum Stein (Phalansterida ord. nov.) and Spongomonas uvella Stein (Spongomonadida ord. nov.). Protozoologica. 19:523-535.

Hibberd, D. J. 1985. Observations on the ultrastructure of the species of Pseudodendromonas Bourrelli (P. operculifera and P. insignis) and Cyathobodo Petersen st Hansen (C. peltatus and C. gemmatus), Pseudodendromonadida. Arch. Protistenk. 129:3-11.

Hibberd, D. J. 1990a. Xanthophyta. In: Margulis, L., J.O. Corliss, M. Melkonian, and D.J. Chapman, eds. 1990. Handbook of the Protoctista; the structure, cultivation, habits and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants and fungi. Jones and  Bartlett Publishers. Boston. pp. 686-697. [L]

Hibberd, D. J. 1990b. Eustigmatophyta. In: Margulis, L., J.O. Corliss, M. Melkonian, and D.J. Chapman, eds. 1990. Handbook of the Protoctista; the structure, cultivation, habits and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants and fungi. Jones and Bartlett Publishers. Boston. pp. 326-333. [L]

Hibberd, D. J. and G. F. Leedale. 1970. Eustigmatophyceae – a new algal class with unique organization of the motile cell. Nature. 225: 759-760. [L]

Hibberd, D. J. and R. E. Norris. 1984. Cytology and ultrastructure of Chlorarachnion reptans (Chlorarachniophyta divisio nova, Chlorarachniophyceae classis nova). Journal of Phycology. 20: 310–330. [L]

Hibbett, D. S. and M. Binder. 2001. Evolution of marine mushrooms. Biological Bulletin. 201: 319-322. [C]

Hibbett, D. S., M. Binder, J. F. Bischoff, M. Blackwell, P. F. Cannon, O. E. Eriksson, S. Huhndorf, T. James, P. M. Kirk, R. Lücking, T. Lumbsch, F. Lutzoni, P. B. Matheny, D. J. Mclaughlin, M. J. Powell, S. Redhead, C. L. Schoch, J. W. Spatafora, J. A. Stalpers, R. Vilgalys, M. C. Aime, A. Aptroot, R. Bauer, D. Begerow, G. L. Benny, L. A. Castlebury, P. W. Crous, Y.-C. Dai, W. Gams, D. M. Geiser, G. W. Griffith, C. Gueidan, D. L. Hawksworth, G. Hestmark, K. Hosaka, R. A. Humber, K. Hyde, J. E. Ironside, U. Kõljalg, C. P. Kurtzman, K.-H. Larsson, R. Lichtwardt, J. Longcore, J. Miądlikowska, A. Miller, J.-M. Moncalvo, S. Mozley-Standridge, F. Oberwinkler, E. Parmasto, V. Reeb, J. D. Rogers, C. Roux, L. Ryvarden, J. P. Sampaio, A. Schüßler, J. Sugiyama, R. G. Thorn, L. Tibell, W. A. Untereiner, C. Walker, Z. Wang, A. Weir, M. Weiß, M. M. White, K. Winka, Y.-J. Yao, and N. Zhang. 2007. A higher-level phylogenetic classification of the Fungi. Mycological Research. 111: 509-547. [C]

Hibbett, D. S., E. M. Pine, E. Langer, G. Langer, and M. J. Donoghue. 1997. Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences. Proceedings of the National Academy of Sciences USA . 94: 12002-12006. [C,L]

Hibbett, D. S. and J. W. Taylor.  2013.  Fungal systematics: is a new age of enlightenment at hand?  Nature Reviews Microbiology.  11: 129-133.

Hickman, C. P. 1973. Biology of the Invertebrates. The C. V. Mosby Company. Saint Louis . [C,L]

Hicks, Y.A., A.D. Marshall, P.L. Rosin, R.R. Martin, M.M. Bayer, and D.G. Mann. 2002. Modeling of life cycle related and individual shape variation in biological specimens. Proceedings of British Machine Vision Conference. 1:323-332. [C]

Hicks, Y., A.D. Marshall, R.R. Martin, and P.L. Rosin. 2002. Automatic landmarking for building biological shape model. Proceedings of the 2002 IEEE International Conference on Image Processing. 2:801-804. [C]

Hicks, Y., D. Marshall, R.R. Martin, L. Rosin, S. Droop, and D.G. Mann. 2004. Building shape and texture models of diatoms for analysis and synthesis of drawings and identification. Proceedings of the Irish Machine Vision and Image Processing Conference 2004 (IMVIP 2004) (Ed. by K.Dawson-Howe, A.C. Kokaram and F.Shevlin), pp. 26–33. Trinity College Dublin, Ireland. [C]

Hidetaka, F., T. Kazuhiko, Y. Koshida. 1992. Development of the infusoriform embryo of Dicyema japonicum (Mesozoa: Dicyemidae). Biological Bulletin. 183: 248-257.

Higgens, M. J., J. E. Sader, P. Mulvaney, and R. Wetherbee. 2003. Probing the surface of living diatoms with atomic force microscopy: the nanostructure and nanomechanical properties of the mucilage layer. Journal of Phycology. 39: 722-734. [L]

Higuchi, M. 2003, Studies on the bryophyte flora of Vanuatu. 7. Stereophyllaceae (Musci): Bulletin of the National Science Museum, Series B, Botany. 29 123–125. [Only Stereophyllum radiculosum recorded.]. 

Higuchi, M. 2004, [Abstract] Taxonomy of Himalayan species of Cryptoleptodon (Musci), p. 45: In K. Iwatsuki (org.), International Symposium 2004: Asian Plant Diversity and Systematics. National Museum of Japanese History, Sakura, Japan.

Higuchi, M, and T Furuki. 2000, Bryophytes of the Imperial palace, Tokyo: Memoirs of the National Science Museum, Tokyo. 34 115–124. 

Higuchi, M, and Shan-Hsiung Lin. 2004, Correlations between the moss floras of Japan and Taiwan: National Science Museum Monographs. 24 227–240.

Hilario, E. and J. P. Gogarten. 1993. Horizontal transfer of ATPase genes: the tree of life becomes a net of life. Biosystems 31:111-119.

Hill, B. H., A. T. Herlihy, P. R. Kaufmann, R. J. Stevenson, F. H. McCormick, and C. B. Johnson. 2000. Use of periphyton assemblage data as an index of biotic integrity. Journal of the American Benthological Society. 19: 50-67.

Hill, K., C. Boesche, J. Goodall, A. Pusey, J. Williams, and R. Wrangham. 2001. Mortality rates among wild chimpanzees. J Hum Evol. 39: 1–14.

Hill, K. and A. M. Hurtado. 1996. Ache Life History: The Ecology and Demography of a Foraging People.  Aldine de Gruyter. New York.

Hill. R. V. 2005. Integration of morphological data sets for phylogenetic analysis of Amniota: The importance of integumentary characters and increased taxonomic sampling.  Systematic Biology. 54: 530-547.

Hill, W. R., and A. W. Knight. 1988. Concurrent grazing effects of two stream insects on Periphyton. Limnology Oceanography. 33(1). 15-26. [C]

Hill, W. R., and A. W. Knight. 1988. Nutrient and Light Limitation of Algae in two Northern California Streams. Journal Of Phycology. 24:  125-132 [C, L]

Hill, W. R., and A. W. Knight. 1987. Experimental Analysis of the grazing Interaction Between a Mayfly and Stream Alagae. Ecology: 68(6): 1955-1965. [C]

Hillis, D.M. and T. P. Wilcox. 2004. Phylogeny of the New World frogs (Rana). Molecular Phylogenetics and Evolution. 34:299-314. [C]

Hillis, D. M., D. E. Sadava, H. C. Heller, and M. V. Price.  2010.  Reconstructing using phylogenies.  In: Principles of Life.  Sinauer Associates and  W. H. Freeman.  309-325.

Hilton, J. 1998.  Spermatophyte preovules from the basal Carboniferous of the Avon Gorge, Bristol.  41(5): 1077-1091.

Hilton, J. 2006a. Pteridosperms are the backbone of seed-plant phylogeny. Journal of the Torrey Botanical Society. 133:  119-168. [C]

Hilton, J. 2006b. Cupulate seed plants from the Upper Devonian Upper Old Red Sandstone at Taffs Well, South Wales. Review of Palaeobotany and Palynology. 142: 137-151. [C]

Hilton, J. and C. J. Cleal. The relationship between Euramerican and Cathaysian tropical floras in the Late Palaeozoic:  Palaeobiogeographical and paleogeographical implications. Earth-Science Reviews. 85:  85-116. [C,L]

Hilton, J. W. Shi-Jun, and T. Baolin.  2003.  Reinvestigation of Cariocarpus minor (Wang) Li nomen nudum from the Lower Permian of China and its implications for seed plant taxonomy, systematics and phylogeny.  Botanical Journal of the Linnean Society.  141: 151-175.

Hilton, J. and R. M. Bateman. 2006. Pteridosperms are the backbone of seed-plant phylogeny. Journal of the Torrey Botanical Society 133(1): 119-168. [C]

Hilu, K. W., T. Borsch, K. Muller, D. E. Soltis, P. A. Soltis, V. Savolainen, M. W. Chase, M. P. Powell, L. A. Alice, R. Evans, H. Sauquet, C. Neinhuis, T. A. B. Slotta, J. G. Rohwer, C. S. Campbell, and L. W. Chatrou. 2003. Angiosperm phylogeny based on MATK sequence information. American Journal of Botany. 90(12): 1758-1776. [C,L]

Himmelreich, R., H. Hilbert, H. Plagens, E. Pirkl, B. Li, and R. Herrmann. 1996. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucleic Acids Research. 24(22): 4420-4449.

Hinchliffe, J. R. 2002. Developmental basis of limb evolution. International Journal of Developmental Biology 46: 835-845. [C]

Hinde, G. J. 1879. On conodonts from the Chazy and Cincinnati Group of the Cambro–Silurian, and from the Hamilton and Genesee–Shale division of the Devonian, in Canada and the United States. Quarterly Journal of the Geological Society, London. 35: 351–369.

Hinde, R. T. 2001. The Cnidaria and Ctenophora. In: Anderson, D.T., ed. Invertebrate zoology. Oxford University Press. Oxford , UK . pp. 29-57.

Hine, P. M., R. B. Carnegie, E. M. Burreson, and M. Y. Engelsma. 2009. Inter-relationships of haplosporidians deduced from ultrastructural studies. Diseases of Aquatic Organisms. 83: 247-256.

Hiramatsu, K., et al. 1997. Methicillin-resistant staphylococcus aureus clinical strain with reduced vancomycin susceptibility. Journal of Antimicrobial Chemotherapy 40: 135-146. 

Hirt, R. P., J. M. Logdon Jr., B. Healey, M. W. Dorey, W.F. Doolittle, and T. M. Embley. 1999. Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins. Proceedings of the National Academy of Sciences USA . 96(2): 580-585. [C,L]

Hirt, R. P., M. Wilkinson, and T. M. Embley. 1998, Molecular and cellular evolution of ciliates: a phylogenetic perspective: In: Coombs, G. H., K. Vickerman, M.A. Sleigh, and A. Warren, eds. Evolutionary relationships among protozoa. Chapman & Hall, London. p. 327–340.

Hirth, F. 2010. On the origin and evolution of the tripartite brain. Brain, Behavior, and Evolution. 76: 3-10. [C]

Hitchin, R. and M. J. Benton. 1997. Congruence between Parsimony and Stratigraphy: Comparison of Three Indices. Paleobiology. 23 (1): 20-32. [C]

Hitchin, R. and M. J. Benton. 1997. Stratigraphic Indices and Tree Balance. Systematic Biology. 46(3): 563-569. [C] 

Hjorth, E., et al. 2004. Zero, one, two, three, and perhaps four- Endosymbiosis and the gain and loss of plastids. Endocytobiosis Cell Res. 15(2): 459-468. 

Ho, B. C, and J. D Kruijer. 2004, [Abstract] Growth patterns in Calyptrochaeta (Hookeriaceae), p. 31: In A. E. Newton, R. Tangney & E. DeLuna (orgs.), Pleurocarpous Mosses: Systematics and Evolution. National Museums & Galleries of Wales, Cardiff, Wales.

Hoare, C. A. 1962, Reservoir hosts and natural foci of human protozoal infections: Acta Trop. 19:281–317.

Hobbie, J.E., R.J. Daley, and S. Jasper. 1977. Use of nucleopore filters for counting bacteria by fluorescence microscopy. Applied and Environmental Microbiology. 33(5):1225-1228. [C]

Hochachka, P. W., H. C. Gunga, and K. Kirsch.  1998.  Our ancestral physiological phenotype: an adaptation for hypoxia tolerance and for endurance performance?  Proceedings of the Natural Academy of Science.  95: 1915-1920.

Hochberg, R. and M. K. Litvaitis. 2001. A muscular double helix in Gastrotricha. Zoologischer Anzeiger. 240: 61-68. [C]

Hockman, D., C. Cretekos, M. Mason, R. Behringer, D. Jacobs, and N. Illing. 2008. A second wave of Sonic hedgehog expression during the development of the bat limb. PNAS. 105(44):16982-16987. 

Hodda, M. 2007. Phylum Nematoda. Zootaxa. 1668: 265-293.

Hoef-Emden, K. and M. Melkonian. 2003. Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into long-hidden dimorphism. Protist. 154:371-409. 

Hoefs, M.J.L. et al., 1997. Ether lipids of plantonic Archaea in the marine water column. Appl. Environ. Microbiol. 63:3090-3095.[L]

Hoegg, S. and A. Meyer. 2005. Hox clusters as models for vertebrate genome evolution. Trends in Genetics 21(8): 421-424. [C]

Hoek, C. van den, D. G. Mann, and H. M. Jahns. 1995. Algae. An Introduction to Phycology. Cambridge University, Cambridge.

Hofmann, H. J., G. M. Narbonne, and J. D. Aitken. 1990. Ediacaran remains from intertillite beds in northwestern Canada. Geology. 18: 1199-1202. [C]

Hofmann, N. R., and S. M. Theg. 2004, [Abstract] Chloroplast protein targeting in Physcomitrella patens: Toc64, p. 14: In R. Reski (org.), Abstract Book: Moss 2004, The 7th Annual Moss International Conference. Plant Biotechnology, University of Freiburg, Freiburg, Germany.

Hoffman, F.G., J.C. Opazo, and J.F. Storz. 2010. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates. PNAS. 107 (32): 14274 – 14279.

Hoffman, Paul F.. A.J. Kaufman, G.P. Halverson, D.P. Schrag. 1998. A Neoproterozoic Snowball Earth. Science. 281: 1342-1346.

Hoffmann, L., J. Komárek, and J. Kastovský. 2005. System of cyanoprokaryotes(cyanobacteria)-state in 2004. Algological Studies 117(6): 95-115. [C] 

Hoffmeister, M. and W. Martin. 2003. Interspecific evolution: microbial symbiosis, endosymbiosis and gene transfer. Environmental Microbiology. 5(8): 641-649. [C]

Hofman, M. A. 1984. On the presumed coevolution of brain size and longevity in hominids. J Hum Evol. 13: 371–376.

Hogan, B., R. Beddington, F. R. Costantini, and E. Lacy. 1994. Isolating High Molecular Weight DNA from Mouse Tails. Manipulating the Mouse Embryo, A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.

Hogg, J. 1860. On the distinctions of a plant and an animal, and on a fourth kingdom of nature. Edinburgh New Philos. J. 12(N.S.):216-225. 

Hohe, A. and R. Reski. 2002. Optimisation of a bioreactor culture of the moss Physcomitrella patens for mass production of protoplasts. Plant Science. 163: 69–74. 

Hohmann-Marriott, M.F., R.E. Blankenship. 2007. Hypothesis on chlorosome biogenesis in green photosynthetic bacteria. FEBS Letters. 581: 800-803.

Holder, M. and P. O. Lewis. 2003. Phylogeny estimation: traditional and Bayesian approaches. Nature Reviews. 4: 275-284. [C]

Holfeld, H. 1998. Fungal infections of the phytoplankton: seasonally, minimal host density, and specificity in a mesotrophic lake. New Phytologist. 138:507–517.

Holland, L. Z. and N. D. Holland. 2001. Evolution of neural crest and placodes: amphioxus as a model for the ancestral vertebrate? Journal of Anatomy 199: 85-98. [C]

Holland, N. D. and J. Chen. 2001. Origin and early evolution of the vertebrates: new insights from advances in molecular biology, anatomy, and paleontology. BioEssays. 23.2:142-151. [C]

Holland, N. D., G. Panganiban, E. L. Henyey, and L. Z. Holland. 1996. Sequence and developmental expression of AmphiDII, and amphioxus Distalless gene transcribed in the ectoderm, epidermis and nervous system: insights into evolution of craniate forebrain and neural crest. Development 122: 2911-2920. [C]

Holland, P. 1998. Major Transitions in Animal Evolution:  A developmental Genetic Perspective. American Zoologist. 38: 829-842 [C,L]

Holland, P. W. H., J. Garcia-Fernandez, Nic A. Williams, and A. Sidow.  1994.  Gene duplications and the origins of vertebrate development.  Development 1994 Supplement.  125-133.

Holland, S. M. 2013. The history of give and take. Nature. 493:308-309.

Holland, W.J. 1910. A review of some recent criticisms of the restoration of Sauropod dinosaurs existing in the museums of the United States, with special reference to that of Diplodocus Carnegiei in the Carnegie Museum. The American Naturalist. 44(521):259-283. [C,L]

Holmes, A. J., et al. 2000. Diverse, yet-to-be-cultured members of the Rubrobacter subdivision of the Actinobacteria are widespread in Australian aird soils. FEMS Microbiology Ecology 33: 111-120. 

Holloway, R. L. 1981a. The Indonesian Homo erectus brain endocast revisited. American Journal of Physical Anthropology. 55: 503–521.

Holloway, R. L. 1981b. Volumetric and asymmetry determination on recent hominid endocasts: Spy I and II, Djebel Irhoud I and the Sale Homo erectus specimens, with some notes on Neandertal brain size. American Journal of Physical Anthropology. 55: 385–393.

Holloway, R. L. 1983a. Human brain evolution: a search for units, models and synthesis. Can J Anthropol. 3: 215–230.

Holloway, R. L. 1983b. Human paleontological evidence relevant to language behavior. Hum Neurobiol. 2: 105–114.

Holloway, R. L. 1988. ‘Robust’ australopithecine brain endocasts: some preliminary observations. In: Grine F, editor. Evolutionary History of the ‘Robust’ Australopithecines.  Aldine de Gruyter. New York. pp. 97–105.

Holman, D. J. and J. W. Wood. 2001. Pregnancy loss and fecundability in women. In: Ellison, P. T., ed. Reproductive Ecology and Human Evolution.  Aldine de Gruyter. New York. pp. 15–38.

Holmes, S. 2008. Statistics for phylogenetic trees. Theoretical Population Biology. 63: 17-32. [C]

Holsinger, K. E. 2000. Reproductive systems and evolution in vascular plants. Proceedings of the National Academy of Sciences 97 (13): 7037-7042. [C]

Holt, J. Glossary of lichen terminology. Unpublished. [C]

Holt, J. G. ed. 1984. Gram-negative bacteria of medical or industrial importance. IN: Bergey’s manual of systematic bacteriology. Volume I. Williams and Wilkins. Baltimore, MD. [L]

Holt, J. G. ed. 1986. Gram-positive bacteria of medical or industrial importance. IN: Bergey’s manual of systematic bacteriology. Volume II. Williams and Wilkins.  Baltimore, MD. [L]

Holt, J. G. ed. 1989a. Other gram-negative bacteria, Cyanobacteria, Archaea. IN: Bergey’s manual of systematic bacteriology. Volume III. Williams and Wilkins. Baltimore, MD.

Holt, J. G. ed. 1989b. Other gram-positive bacteria. IN: Bergey’s manual of systematic bacteriology. Volume IV. Williams and Wilkins. Baltimore , MD. [L]

Holterman, M., A. Wurff, S. Elsen, H. Megen, T. Bongers, O. Holovachov, J. Bakker, and J. Helder. 2006. Phylum-Wide Analysis of SSU rDNA Reveals Deep Phylogenetic Relationships among Nematodes and Accelerated Evolution toward Crown Clades. Molecular Biology and Evolution. 23(9):1792-1800.

Holton R. W. S. A. Boele-Bos, andW. T. Stam. 1998. Phylogenetic relationships of the freshwater alga Boldia erythrosiphon (Compsopogonales, Rhodophyta) based on 18S rRNA gene sequences (note). Journal of Phycology 34: 555-555. [L]

Holton, T. A. and D. Pisani. 2010. Deep genomic-scale analyses of the Metazoa reject coelomata: evidence from single- and multigene families analyzed under a supertree and supermatrix paradigm. Genome Biology and Evolution. 2: 310-324. [C]

Holynski, R. B. 2011.  Philosophy, evolution, and taxonomy, or: what biological classification is for? (Practicising biologist’s comments on some recent papers by Podani).  Munis Entomology & Zoology Journal.  6(2): 525-533.

Holz, G.G. 1966. Is Tetrahymena a plant? Journal of Protozoology. 13(1): 2-4. [C,L]

Holz, I. 2003, Diversity and Ecology of Bryophytes and Macrolichens in Primary and Secondary Montane Quercus Forests, Cordillera de Talamanca, Costa Rica. [vi] 172 pp: Georg-August-Universität zu Göttingen, Göttingen, Germany. [Doctoral dissertation].

Homberg, U.  2008.  Evolution of the central complex in the arthropod brain with respect to the visual system.  Arthropod Structure and Development.  37: 347-362.  

Homma, K. and J. W. Hastings. 1989. Cell growth kinetics, division asymmetry and volume control at division in th emarine dinoflagellate Gonyaulax polyedra: a model of circadian clock control of the cell cycle. Journal of Cell Science. 92: 303-318. [C]

Hommersand, M. and H. S. Fredericq. 1988. An investigation of cystocarp development in Gelidium pteridifolium with a revised description of the Gelidiales (Rhodophyta). Phycologia. 27: 254-254.

Hommersand, M. and H. S. Fredericq. 1990. Sexual reproduction and cystocarp development. In K. M. Cole and R. G. Sheath, eds. Biology of the red algae, 305–345. Cambridge University Press, Cambridge, UK. [L]

Honda D. and I. Inouye. 2002. Ultrastructure and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen. et sp. nov. (Pinguiophyceae) with emphasis on the flagellar apparatus architecture. Phycological Research. 50: 75-89.

Honda, D., A. Yokota, and J. Sugiyama. 1999. Detection of Seven Major Evolutionary Lineages in Cyanobacteria Based on the 16S rRNA Gene Sequence Analysis with New Sequences of Five Marine Synechococcus Strains. Journal of Molecular Biology. 48: 723-739. [C, L]

Honegger, R. 1978. The ascus apex in lichenized fungi I. the Lecanora-, Peltigera- and Teloschistes- types. Lichenologist. 10: 47-67. [C]

Honegger, R. 1993. Tansley review no. 60 developmental biology of lichens. New Phytologist. 125: 659-677. [C]

Hong, D., Z. Chen, Y. Qiu, and M.J. Donoghue. 2008. Tracing patterns of evolution through the tree of life:  introduction. Journal of Systematics and Evolution. 46(3):  237-238. [C]

Honigberg, B. M. 1973. Remarks upon trichomonad affinities of certain parasitic protozoa. In Progress in Protozoology: Abstracts of Papers Read at the 4th International Congress of Protozoology, Clermont-Ferrand, 2–10 September 1973, p. 187. Edited by P. De Puytorac & J. Grain. Clermont-Ferrand: Universite´ de Clermont.

Honigsbaum, M. 2002. The fever trail: in search of the cure for malaria. Farrar, Straus & Giroux, New York.

Hood, M.A., and M.T.  MacDonnell. 1987. Distribution of ultramicrobacteria in a gulf coast estuary and induction of ultramicrobacteria. Microb. Ecol. 14:113-127. [L]

Hood, M.A., J.B. Gluckert, D.C. White, and F.  Deck. 1986. Effect of nutrient deprivation on lipid, carbohydrate, DNA, RNA, and protein levels in Vibrio cholerae. Appl. Environ. Microbiol. 52:788-793. [L]

Hoofer, S., S. Reeder, E. Hansen, and R. Van Den Bussche. 2003. Molecular phylogenetics and taxonomic review of Noctilionoid and Vespertilionoid bats (Chiroptera: Yangochriroptera). Journal of Mammalogy. 84(3):809-821. 

Hooge, M. D., P. A. Haye, S. Tyler, M. K. Litvaitis, I. Kornfield. 2002. Molecular systematics of the Acoela (Acoelomorpha, Platyhelminthes) and its concordance with morphology. Molecular Phylogenetics and Evolution. 24:333-342. [C]

Hoot, S. B. and P. R. Crane. 1995. Interfamilial relationships in the Ranunculidae based on molecular systematics. Plant Systematics and Evolution 9 (Suppl.):119-131.

Hoot, S. B., A. Culham, and P. R. Crane. 1995. The utility of atpB gene sequences in resolving phylogenetic relationships-comparison with rbcL and 18S ribosomal DNA sequences in the Lardizabalaceae. Ann. Missouri Bot. Gard. 82:194-207.

Hoot, S. B., S. Magallón-Puebla, and P. R. Crane. 1999. Phylogeny of basal eudicots based on three molecular datasets: atpB and rbcL sequences, trnK restriction sites and morphological characters. Annals of the Missouri Botanical Garden 86:119-131.

Hoover, R.B., E.V. Pikuta, A.K. Bej, D. Marsic, W.B. Whitman, J. Tang, and P. Krader. 2003. Spirochaeta americana sp. nov., a new haloalkaliphilic, obligately anaerobic spirochaete isolated from soda Mono Lake in California. International Journal of Systematic and Evolutionary Microbiology. 53: 815-821. 

Hoppenrath, M. and B. Leander. 2006. Ebriid phylogeny and the expansion of the Cercozoa. Protist. 157: 279-290.

Hoppenrath, M. and B. Leander. 2010.  Dinoflagellate phylogeny as inferred from heat shock protein 90 and ribosomal gene sequences.  PLoS ONE. 5(10): 1-11.

Hoppenrath, M., T. R. Bachvaroff, S. M. Handy, C. F. Delwiche, and B. S. Leander.  2009.  Molecular phylogeny of ocelloid-bearing dinoflagellates ( Warnowiaceae) as inferred from SSU and LSU rDNA sequences.  BMC Evolutionary Biology.  9: 1-15.

Hopson, J. A. 1969. The origin and adaptive radiation of mammal-like reptiles and non-therian mammals.  Annals of the New York Academy of Science. 167: 199-216.

Hopson, J. A. and H. R. Barghusen. 1986.  An analysis of therapsid relationships. In: N. Hotton, P. D. MacLean, J. J. Roth, and E. C. Roth, eds. The Ecology and Biology of Mammal-like Reptiles. Smithsonian Inst. Press. pp. 83-106.

Horai, S., K. Hayasaka, R. Kondo, K. Tsugane, and N. Takahata. 1995. Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs. Proc. Natl. Acad. Sci. USA 92: 532–536.

Horandl, E. 2010.  Beyond cladistics: extending evolutionary classifications into deeper time levels.  Taxon.  59(2): 345-350.

Horandl, E. and T. F. Stuessy.  2010.  Paraphyletic groups as natural units of biological classification.  Taxon. 59(6): 1641-1653.  

Hori, H. and S. Osawa. 1987. Origin ans evolution of organisms asdeduced from 5S ribosomal RNA sequences. Molecular Biology and Evolution. 4:445-472. 

Hori T. and J. C. Green. 1985a. The ultrastructure of mitosis in Isochrysis galbana Parke (Prymnesiophyceae). Protoplasma. 125: 140-151.

Hori T. and J. C. Green. 1985b. The ultrastructural changes during mitosis in Imantonia rotunda Reynolds (Prymnesiophyceae). Botanica Marina. 27: 67-78.

Hori T. and J. C. Green. 1985c. An ultrastructural study of mitosis in the non-motile coccolith-bearing cells of Emiliania huxleyi (Lohm.) Hay et Mohler (Prymnesiophyceae). Protistologica. 21: 107-120.

Hori T. and J. C. Green. 1994 Mitosis and cell division. In: J. C. Green and B. S. C. Leadbeater, eds. The Haptophyte Algae. Clarendon Press. Oxford, UK. pp. 91–109.

Hori T. and I. Inouye. 1981. The ultrastructure of the flagellar apparatus in Pleurochrysis (Class Prymnesiophyceae). Protoplasma. 125: 24-35.

Horigome, N., M. Myojin, T. Ueki, S. Hirano, S. Aizawa, and S. Kuratani. 1999. Development of Cephalic Neural Crest Cells in Embryos of Lampetra japonica, with Special Reference to the Evolution of the Jaw. Developmental Biology 207: 287-308. [C]

Horikoshi, K. and W. D. Grant. 1998. Extremophiles: Microbiological Life in Extreme Environments. Wiley-Liss, New York.

Horn, S., K. Ehlers, G. Fritzsch, M. C. Gil Rodríguez, C. Wilhelm, and R. Schnetter. 2007. Synchroma grande spec. nov. (synchromophyceae class. nov., Heterokintophyta): an amoeboid marine alga with unique plastid complexes. Protist. 158: 277-293.

Horner, D.S. and R.P. Hirt. 2004. An overview on eukaryote origins and evolution: the beauty of the cell and the fabulous gene phylohgenies. In: Hirt, R.P. and D.S. Horner. Organelles, Genomes and Eukaryote Phylogeny, An Evolutionary Synthesis in the Age of Genomics. CRC Press. New York. pp.1-26.

Horner, D.S., Lefkimmiatis, K., Reyes, A., Gissi, C., Saccone, C., and G. Pesole. 2007. Phylogenetic analyses of complete mitochondrial genome sequences suggest a basal divergence of the enigmatic rodent Anomalurus. BMC Evolutionary Biology. 7(16): 1-12.

Horstmann, V, C. M Heuther, W Jost, R Reski, and E. L Decker. 2004, [Abstract] Quantitative promoter analysis in Physcomitrella patens: a set of plant vectors activating gene expression within three orders of magnitude, p. 68: In R. Reski (org.), Abstract Book: Moss 2004, The 7th Annual Moss International Conference. Plant Biotechnology, University of Freiburg, Freiburg, Germany.

Horton, A. C., N. R. Mahadevan, C. Minguillon, K. Osoegawa, D. S. Rokhsar, I. Ruvinsky, P. J. de Jong, M. P. Logan, and J. J. Gibson-Brown. 2008. Conservation of linkage and evolution of developmental function within the Tbx2/2/4/5 subfamily of T-box genes: implications for the origin of vertebrte limbs. Development Genes and Evolution. 218: 613-628. [C]

Hoshaw, R. W., R. M. McCourt, and J. C. Wang. 1990. Conjugaphyta. In: Margulis, L., J.O. Corliss, M. Melkonian, and D.J. Chapman, eds. 1990. Handbook of the Protoctista; the structure, cultivation, habits and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants and fungi. Jones and Bartlett Publishers. Boston. pp. 119-133. [L]

Hotes, S. 2004, Influence of tephra deposition on mire vegetation in Hokkaido, Japan: Dissertationes Botanicae. 383 i–viii. 1–304. 

Hotes, S, P Poschlod, H Takahashi, A. P Grootjans, and E Adema. 2004, Effects of tephra deposition on mire vegetation: a field experiment in Hokkaido, Japan: Journal of Ecology. 92 624–634. 

Hou, Yi-Long, and Tong Cao. 2004, RAPD analysis of 15 mosses species from northeast China and its taxonomic implication: Bulletin of Botanical Research. 24 477–481. [In Chinese with English abstract.].

House, C.H., B. Runnegar, and S.T. Fitz-Gibbon. 2003. Geobiological analysis using whole genome-based tree building applied to the Bacteria, Archaea, and Eukarya. Geobiology. 1:15-26. [C]

Howarth, D. G. and M. J. Donoghue. 2006. Phylogenetic analysis of the “ECE” (CYC/TB1) clade reveals duplications predating the core eudicots. Proceedings of the National Academy of Science. 103(24): 9101-9106. [C]

Howe, A. T., D. Bass, K. Vickerman, E. E. Chao, and T. Cavalier-Smith.  2009.  Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadid ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).  Protist. 160: 159-189.

Howe, A. T., D. Bass, J. M. Scoble, R. Lewis, K. Vickerman, H. Arndt, and T. Cavalier-Smith. 2011. Novel cultured protists identify deep-branching environmental DNA clades of Cercozoa: new genera Tremula, Micrometopion, Minimassisteria, Nudifilia, Peregrinia. Protist. 162: 332-372.Howell, N. 1979. Demography of the Dobe !Kung. New York: Academic Press.

Hu, S. and  A.H.C. van Bruggen. 1997. Microbial dynamics associated with multiphasic decomposition of 14C-labeled cellulose in soil. Microb. Ecol. 33:134-143.[L]

Huang, J. and J. P. Gogarten. 2007. Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids? Genome Biology. 8: R99 [C]

Huang, W. M. 1996. Bacterial diversity based on type II DNA topoisomerase genes. Annual Review of Genetics 30:79-107.

Huang, Y. P. and J. Ito. 1999. DNA polymerase c of the thermophilic bacterium Thermus aquaticus: classification and phylogenetic analysis of the family c DNA polymerases. Journal of Molecular Evolution 48:756-769.

Huber, H 1969. Die Samenmerkmale und Verwandtschaftsverhaltnisse der Liliiflorae. Mitt. Bot. Staatssamml. Munchen 8: 219-538.

Huber, H 1977. The treatment of the monocotyledons in an evolutionary system of classification. Pl. Syst. Evol., Suppl. 1: 285-298.

Huber, H. and K.O. Stetter. 1998. Hyperthermophiles and their possible potential in biotechnology. Journal of Biotechnology 64: 39-52. 

Huber, H., M. J. Hohn, R. Rachel, T. Fuchs, V. C. Wimmer, and K. O. Stetter. 2002. A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont. Nature 417: 63-67. [L]

Huckreide, R. 1958. Die Conodonten der Mediterranean Trias und ihr stratigraphischer Wert. Paläontologische Zeitschrift. 32: 141–175.

Hudson, H. J. 1984. Kingdom Fungi.  In: Barnes, R. S. K., ed. A Synoptic Classification of Living Organisms. Sinauer Associates. Sunderland, Mass. pp. 91- 109.

Hudspeth, D. S. S., S. A. Nadler, and M. E. S. Hudspeth.  2000.  A COX2 molecular phylogeny of the Peronosporomycetes.  Mycologia.  92(4): 674-684.  

Huene, F. von. 1946. Die grossen Stamme der Tetrapoden in den geologischen Zeiten. Biolog. Zentralblatt. 65(7/12) 266-275.

Hufford, L. 2001. Ontology and morphology of the fertile flowers of Hydrangea and allied genera of tribe Hydrangeeae (Hydrangeaceae). Botanical Journal of the Linnean Society 137: 139-187. 

Hug, L. A., B. J. Baker, K. Anantharaman, C T. Brown, A. J. Probst, C. J. Castelle, C. N. Butterfield, A. W. Hernsdorf, Y. Amano, K. Ise, Y. Suzuki, N. Dudek, D. A. relman, K. M. Finstad, R. Amundson, B. C. Thomas, and J. F. Banfield. 2016. A new view of the tree of life. Nature Microbiology. 16048: DOI: 10.1038/NMICROBIOL.2016.48

Hugenholtz, P., B. M. Goebel, and N. R. Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. Journal of Bacteriology 180:4765-4774.

Hugenholtz, P. and E. Stackebrandt. 2004. Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description). International Journal of Systematic and Evolutionary Microbiology. 54:2049-2051. [C]

Hughes, Nigel C. 2003. Trilobite Tagmosis and Body Patterning from Morphological and Developmental Perspectives. Integrative and Comparative Biology. 43: 185-206.

Hughes, N. F. 1994. The enigma of angiosperm origins. The Cambridge Paleobiology Series. No 1.Cambridge University Press. Cambridge, UK.

Hughson, F. M. 2013. Chaperones that SNARE Neurotransmitter Release. Nature. 339: 406-407.

Hugonnot, V. 2004, Contribution à la chorologie et à l’écologie des Ricciacées du Massif Central (France), principalement de l’Ardèche et de la Haute-Loire: Cryptogamie Bryologie. 25 39–67. 

Hugonnot, V., and S. Ully. 2004. Stations de Cryptothallus mirabilis Malmb. (Aneuraceae) dans le Massif Central (France). Monde des Plantes. 482: 4–5. 

Huisman J. M., A. R. Sherwood, and I. A. Abbott. 2003. Morphology, reproduction, and the 18S rRNA gene sequence of Pihiella liagoraciphila gen. et sp. nov. (Rhodophyta), the so-called ‘monosporangial discs’ associated with members of the Liagoraceae (Rhodophyta) and proposal of the Pihiellales ord. nov. Journal of Phycology 39: 978-978. [C,L]

Humber, R. A. 2008. Evolution of entomopathogenicity in fungi. Journal of Invertebrate Pathology. 98(3): 262-266. [C]

Humber, R. A. 2012.  Entomophthoromycota: a new phylum and reclassification for entomophthoroid fungi.  Mycotaxon.  120: 477-492.  

Huminiecki, L. and C. H. Helden. 2010. 2R and remodeling of vertebrate signal transduction engine. BMC Biology. 8: 146. doi:10.1186/1741-7007-8-146.

Hummon, W. D. and M. A. Todaro.  2010.  Analytic taxonomy and notes on marine, brackish-water and estuarine Gastrotricha.  Zootaxa.  2392: 1-32.

Humphrey, B., S. Kjelleberg, and K.C. Marshall. 1983. Responses of marine bacteria under starvation conditions at a solid-water interface. Appl. Environ. Microbiol. 45:43-47.[L]

Humphrey, L. T., M. C. Dean, and T. E. Jeffries. 2007. An evaluation of changes in strontium/calcium ratios across the neonatal line in human deciduous teeth. In: Bailey, S. E. and J-J. Hublin, eds. Dental Perspectives on Human Evolution. Springer. The Netherlands. pp. 303–319.

Hunter, B. T. 1972. Carrageenan, an additive widely used in food manufacture-a cause of human ulcerative colitis. Consumer Bulletin. 16-17, 34. [C]

Hunter Jr., M. L. and S. L. Webb. 2002. Enlisting taxonomists to survey poorly known taxa for biodiversity conservation: a lichen case study. Conservation Biology. 16(3): 660-665. [C]

Hunter, P. A., G. K. Darby, and N. J. Russel. eds. 1995. Fifty years of antimicrobials: past perspectives and future trends: Society for General Microbiology, Symposium No. 53. Cambridge University Press, Cambridge, UK.

Hunter, S. H. 1985. Class Mycetozoa. In: Lee, J.J., S.H. Hunter, and E.C. Bovee, eds. An Illustrated Guide to the Protozoa. Allen Press. Lawrence, Kansas. pp. 214-227. [L]

Hunter-Cevera, J., D. Karl, and M. Buckley. 2005. Marine microbial diversity: the key to Earth’s habitability. Amercian Academy of Microbiology. 1-22 [C]

Huntley, M., P. Sykes, V. Marin, and S. Rohan. 1986. Chemically-mediated rejection of dinoflagellate prey by copepods Calanus pacificus and Paracalanus parvus: mechanism, occurrence, and significance. Marine Ecology Progress Series., 28:105–120. 

Hunziker, J. H. 2000. Some historical aspects of plant cytogenetics in Argentina and Uruguay. Genetics and Molecular Biology. 23(4): 917-920. [C]

Hurum, J. H., Z. Luo, and Z. Kielan-Jaworowska. 2006. Were mammals originally venemous? Acta Palaeontologica Polonica. 51(1): 1-11. [C]

Hussain, M. A., V. Verma, and M. Z. Abdin. 2008. Molecular analysis of dicot-monocot split and relationship among major angiosperm groups. African Journal of Plant Science. 2(1): 001-004. [C]

Hustedt F. 1928. Die Kieselalgen Deutschlands, Österreichs und der Schweiz.In: L. Rabenhorst, ed. Kryptogamen-Flora von Deutschlands, Österreichs und der Schweiz, Bd. VII, Teil 1, Lief. 2. pp. 273–464.

Hutcheon, J. M., and J. A. W. Kirsch. 2006. A moveable face: deconstructing the Microchiroptera and a new classification of extant bats. Acta Chiropterologica. 8(1): 1-10.

Hutcheon, J. M., J. A. Kirsch, and J. D. Pettigrew. 1998. Base-compositional biases and the bat problem. III. The question of microchiropteran monophyly. The Royal Society. 353: 607-617.

Hutner, S. H. 1964, Biochemistry and Physiology of Protozoa. Vol. 3: Academic Press, New York. [L]

Huttuen, S. 2004. Phylogeny and evolutionary relationships of the moss families Brachytheciaceae and Meteoriaceae. Botany from the University of Helsinki. 34:5-33. [C]

Huttunen, S, M. S Ignatov, K Müller, and D Quandt. 2004, Phylogeny and evolution of epiphytism in the three moss families Meteoriaceae, Brachytheciaceae, and Lembophyllaceae: Monographs in Systematic Botany from the Missouri Botanical Garden. 98 328–361. 

Huttunen, S, and D Quandt. 2004, [Abstract] Generic delimitation in Meteoriaceae in light of molecular data, p. 22: In A. E. Newton, R. Tangney & E. DeLuna (orgs.), Pleurocarpous Mosses: Systematics and Evolution. National Museums & Galleries of Wales, Cardiff, Wales.

Huxley T. H. 1858. Appendix A. In: J. Dayman, ed. Deep-sea soundings in the North Atlantic Ocean between Ireland and Newfoundland. Her Majesty’s Stationary Office. London, UK. pp. 63–68.

Huxley, T. H. 1875. Remarks on the Classification of the Animal Kingdom. Journal of the Linnean Society. 12: 199-226.

Huxley, T. H. 1880. On the application of the laws of evolution to the arrangement of the Vertebrata and more particularly of the Mammalia. Proceedings of the Zoological Society of London. 1880: 649–662.

Huxley, J. S. 1911. Some phenomena of regeneration in Sycon; with a note on the structure of its collar cells. Philosophical Transactions of the Royal Society of London B. 202: 165-189.

Huyghe, P. 1998. Conan the Bacterium. The Sciences. 16-19.

Hyman, L. H. 1940. The Invertebrates. Volume 1, Protozoa through Ctenophora. McGraw-Hill Book Company, Inc. New York and London.

Hyman, L. H. 1951. The Invertebrates. Volume 2, Platyhelminthes and Rhynchocoela. McGraw-Hill Book Company, Inc. New York and London.

Hyman, L. H. 1951. The Invertebrates. Volume 3, Acanthocephala, Aschelminthes, and Entoprocta. McGraw-Hill Book Company, Inc. New York and London.

Hyman, L. H. 1955. The Invertebrates. Volume 4, Echinodermata. McGraw-Hill Book Company, Inc. New York and London.

Hyman, L. H. 1959. The Invertebrates. Volume 5, Smaller Coelomate Groups. McGraw-Hill Book Company, Inc. New York and London.

Hyman, L. H. 1967. The Invertebrates. Volume 6, Mollusca I. McGraw-Hill Book Company, Inc. New York and London.

Hyvönen, J, and S Koskinen. 2004, [Abstract] Phylogeny of Polytrichales reoptimized, p. 16: In S. R. Gradstein, J. Heinrichs & R. Wilson (orgs.), Bryophylogeny 2004. 10–12 September. Second International Symposium on Molecular Systematics of Bryophytes. Albrecht von Haller Institute of Plant Sciences, Göttingen, Germany.

Hyvönen, J., S. Koskinen, G. L. Smith Merrill, T. A. Hedderson, and S. Stenroos. 2004. Phylogeny of the polytrichales (Bryophyta) based on simultaneous analysis of molecualr and morphological data. Molecular Phylogentics and Evolutions. 31: 915-928. [C]

Hyvönen, J. and S. Piippo. 1993. Cladistic analysis of the hornworts (Anthocerotophyta). Journal of the Hattori Botanical Lab. 74: 105-119.

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By Jack R. Holt.  Last revised: 08/20/2021