| Below are four (Figures 2 and 4 from their paper) of the parsimonious trees generated by the analysis of Daubin et al (2002). Daubin, Vincent, Manolo Gouy, and Guy Perrière. 2002. A Phylogenomic Approach to Bacterial Phylogeny: Evidence of a Core of Genes Sharing a Common History. Genome Research 12 (7): 1080-1090. |
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| Figure 2 (A & B above). Supertrees of 45 species constructed with 730 trees. (A) Supertree based on trees made by BIONJ and a gamma distribution estimation of evolutionary rate heterogeneity. (B) Supertree made with ML trees. Only bootstrap values over 50% are shown. |
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| Figure 4 (A & B above). Supertrees of 45 species built with the trees selected using the PCO results. (A) Supertree based on 121 trees made by BIONJ and a gamma distribution estimation of evolutionary rate heterogeneity. (B) Supertree based on 118 ML trees. |
